BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C05LP1|AL424930
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig606 1516 0.0
>3x_Contig606
Length = 2641
Score = 1516 bits (763), Expect = 0.0
Identities = 792/799 (99%), Gaps = 3/799 (0%)
Strand = Plus / Minus
Query: 198 gagaaaattatcacgtgacatatggcactggacgtttagggattttgcmaacaacgacat 257
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2641 gagaaaattatcacgtgacatatggcactggacgtttagggattttgcaaacaacgacat 2582
Query: 258 ctccattaatcctaacaaagccatcgcatgtagtcataagtcctgactcactacattgcc 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 ctccattaatcctaacaaagccatcgcatgtagtcataagtcctgactcactacattgcc 2522
Query: 318 gatatttccattagtcccgggggtgctgaaattgaatccccattctccagcgaacaaaaa 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gatatttccattagtcccgggggtgctgaaattgaatccccattctccagcgaacaaaaa 2462
Query: 378 agtggagattcacctcttttcctccataatttatccaaatacctccgattttaccccagt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 agtggagattcacctcttttcctccataatttatccaaatacctccgattttaccccagt 2402
Query: 438 tttttttttacaagaaatcgctcattctaagtagacacagaaatgcatttcttctccagg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 tttttttttacaagaaatcgctcattctaagtagacacagaaatgcatttcttctccagg 2342
Query: 498 ttttcttcaggagttaacatagaattcagacaataaaccttgatcccggaaaaacattac 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ttttcttcaggagttaacatagaattcagacaataaaccttgatcccggaaaaacattac 2282
Query: 558 aaggaaggccgtagaaaatgttttctacggtgtctttaccagttacttccctgttttcct 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 aaggaaggccgtagaaaatgttttctacggtgtctttaccagttacttccctgttttcct 2222
Query: 618 ctatcaggtttgccacaaaagctgaaaaatgaacgcggtgcaataggtgcagtgtgggtg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ctatcaggtttgccacaaaagctgaaaaatgaacgcggtgcaataggtgcagtgtgggtg 2162
Query: 678 ttcagtttgagcagcctattttttgttgatgtggttttttacaagctctaagggtgctta 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ttcagtttgagcagcctattttttgttgatgtggttttttacaagctctaagggtgctta 2102
Query: 738 cataatgctacgtactaaacttctctctctatcccaaggccttccagtgaaagtaggtgc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 cataatgctacgtactaaacttctctctctatcccaaggccttccagtgaaagtaggtgc 2042
Query: 798 tttattcgatgactgaagagattcggtttgcctttagtctgagaaatactgaatggttaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 tttattcgatgactgaagagattcggtttgcctttagtctgagaaatactgaatggttaa 1982
Query: 858 agtcagttcgggatgcggastaagatacgtgaaagtctatgtttctccgtctggcattga 917
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 agtcagttcgggatgcggagctagatacgtgaaagtctatgtttctccgtctggcattga 1922
Query: 918 aagactgggctcaagcctatgaggg-cagcatcactcttctgtttcc-acgcaa-cctct 974
||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||
Sbjct: 1921 aagactgggctcaagcctatgagggccagcatcactcttctgtttccaacgcaaccctct 1862
Query: 975 tcactgatctctttggcgt 993
|||||||||||||||||||
Sbjct: 1861 tcactgatctctttggcgt 1843
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7647
Number of Sequences: 1807
Number of extensions: 7647
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)